Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HDAC6Q9UBN7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 AIRN-201ENST00000601203 4374 ntBASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 BNIP3P18-201ENST00000593976 575 ntBASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 ANO7L1-203ENST00000602586 1720 ntBASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HDAC6Q9UBN7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 HLA-A-201ENST00000376802 1334 ntBASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 MIR149-201ENST00000384879 89 ntBASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 TSPY12P-201ENST00000421279 868 ntBASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 AC083906.6-201ENST00000641366 219 ntBASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HDAC6Q9UBN7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.28■□□□□ 0.84
HDAC6Q9UBN7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms