Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 AC097374.2-201ENST00000618617 1306 ntBASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT1Q9P2V4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 PHGDH-209ENST00000641074 1780 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 FAM220CP-201ENST00000395253 831 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 HNRNPDP1-201ENST00000439535 754 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 AC139887.3-201ENST00000568585 713 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 AL049840.3-201ENST00000602669 611 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 FAM215A-202ENST00000632077 792 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 AC073592.3-201ENST00000625118 1834 ntBASIC17.31■□□□□ 0.36
LRIT1Q9P2V4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AC243591.1-201ENST00000452967 1364 ntBASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AL356309.3-201ENST00000624132 1934 ntBASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AC007967.3-201ENST00000434308 558 ntBASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 SART3-203ENST00000546611 1184 ntBASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AC021087.4-201ENST00000563761 564 ntBASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT1Q9P2V4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms