Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 AC008894.3-201ENST00000624324 3103 ntBASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMARCAL1Q9NZC9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 AL355355.2-201ENST00000442321 338 ntBASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 AC097488.1-201ENST00000507834 756 ntBASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMARCAL1Q9NZC9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 NUDT16P1-203ENST00000513809 620 ntBASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCAL1Q9NZC9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 AC018695.7-201ENST00000624587 2492 ntBASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 TSPY7P-201ENST00000431358 1114 ntBASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 AC026471.5-201ENST00000615068 467 ntBASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCAL1Q9NZC9 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms