Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 KRT8P50-201ENST00000562022 1438 ntBASIC17.42■□□□□ 0.38
NDE1Q9NXR1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NDE1Q9NXR1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 AL355312.1-201ENST00000407115 2176 ntBASIC17.41■□□□□ 0.38
NDE1Q9NXR1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 AC083906.2-201ENST00000511578 360 ntBASIC17.41■□□□□ 0.38
NDE1Q9NXR1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 AC009102.3-201ENST00000623118 1491 ntBASIC17.41■□□□□ 0.38
NDE1Q9NXR1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDE1Q9NXR1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.4■□□□□ 0.38
NDE1Q9NXR1 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 DOC2GP-204ENST00000639052 2548 ntBASIC17.4■□□□□ 0.38
NDE1Q9NXR1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 MIR149-201ENST00000384879 89 ntBASIC17.4■□□□□ 0.38
NDE1Q9NXR1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NDE1Q9NXR1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms