Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 AC092337.1-201ENST00000568699 1129 ntBASIC16.47■□□□□ 0.23
RYDENQ9NUL5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 CLEC4GP1-201ENST00000596555 870 ntBASIC16.47■□□□□ 0.23
RYDENQ9NUL5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RYDENQ9NUL5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC093503.3-201ENST00000624917 2352 ntBASIC16.46■□□□□ 0.23
RYDENQ9NUL5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 BCL2-203ENST00000589955 5011 ntBASIC16.46■□□□□ 0.23
RYDENQ9NUL5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 FAM220CP-201ENST00000395253 831 ntBASIC16.46■□□□□ 0.23
RYDENQ9NUL5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC017099.1-201ENST00000448261 1028 ntBASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC008147.4-201ENST00000617570 1204 ntBASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AC048344.4-201ENST00000619744 527 ntBASIC16.46■□□□□ 0.23
RYDENQ9NUL5 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RYDENQ9NUL5 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.46■□□□□ 0.22
RYDENQ9NUL5 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.46■□□□□ 0.22
RYDENQ9NUL5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 KRT18P55-202ENST00000578578 1546 ntBASIC16.45■□□□□ 0.22
RYDENQ9NUL5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 RPL5-202ENST00000370321 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 AL450487.1-201ENST00000426799 995 ntBASIC16.45■□□□□ 0.22
RYDENQ9NUL5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.45■□□□□ 0.22
RYDENQ9NUL5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RYDENQ9NUL5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms