Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 AC006116.8-202ENST00000587620 1550 ntBASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.07□□□□□ -0.48
SND1-IT1Q9HBX3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 GMCL1P1-201ENST00000463439 1581 ntBASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 AC131212.4-201ENST00000623606 975 ntBASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 AC133041.1-202ENST00000642053 222 ntBASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SND1-IT1Q9HBX3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.05□□□□□ -0.48
SND1-IT1Q9HBX3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms