Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.58■□□□□ 0.56
RNF38Q9H0F5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF38Q9H0F5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 AC010460.3-201ENST00000511359 1579 ntBASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 ABCD1P5-201ENST00000445663 754 ntBASIC18.57■□□□□ 0.56
RNF38Q9H0F5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF38Q9H0F5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.56■□□□□ 0.56
RNF38Q9H0F5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 RBM17P3-201ENST00000417687 1192 ntBASIC18.56■□□□□ 0.56
RNF38Q9H0F5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 AC096633.1-201ENST00000422446 749 ntBASIC18.56■□□□□ 0.56
RNF38Q9H0F5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF38Q9H0F5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AC104581.1-202ENST00000635932 2618 ntBASIC18.55■□□□□ 0.56
RNF38Q9H0F5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 KRT18P67-201ENST00000432816 1264 ntBASIC18.55■□□□□ 0.56
RNF38Q9H0F5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 RNPS1P1-201ENST00000507437 918 ntBASIC18.55■□□□□ 0.56
RNF38Q9H0F5 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AC064862.7-201ENST00000604520 867 ntBASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AL773604.1-201ENST00000617417 272 ntBASIC18.55■□□□□ 0.56
RNF38Q9H0F5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNF38Q9H0F5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms