Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AL078644.1-201ENST00000609881 752 ntBASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 AC125634.1-201ENST00000438758 1403 ntBASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
UBE2OQ9C0C9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 AC008687.5-201ENST00000593746 558 ntBASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 AC092865.6-201ENST00000642101 219 ntBASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 ELL2P1-201ENST00000413990 1906 ntBASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 AC093484.2-201ENST00000580996 2166 ntBASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 IRX1P1-201ENST00000438849 1838 ntBASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBE2OQ9C0C9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 MKNK2P1-201ENST00000437526 628 ntBASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 AL357033.4-201ENST00000617703 1807 ntBASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 FP475955.4-201ENST00000623131 1990 ntBASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBE2OQ9C0C9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 TSEN15P1-201ENST00000423257 515 ntBASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AC005034.1-201ENST00000426657 489 ntBASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.72■□□□□ 0.75
UBE2OQ9C0C9 AC027612.4-201ENST00000605371 583 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms