Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AC097488.1-201ENST00000507834 756 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AC104390.1-201ENST00000555663 520 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CD177P1-201ENST00000606252 935 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 DGCR10-201ENST00000609839 495 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AL023803.3-201ENST00000615559 522 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CR769767.2-201ENST00000622735 460 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 HLA-J-201ENST00000462773 1622 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AC105020.1-201ENST00000435356 2205 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 PCDHB19P-201ENST00000570871 2371 ntBASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP3-1Q9BYR8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 WWOX-216ENST00000569818 525 ntBASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 AIRN-201ENST00000601203 4374 ntBASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP3-1Q9BYR8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms