Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 KRT18P56-201ENST00000507275 550 ntBASIC12.53□□□□□ -0.4
UPK3BQ9BT76 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK3BQ9BT76 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.52□□□□□ -0.4
UPK3BQ9BT76 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 RNF126P1-202ENST00000569893 925 ntBASIC12.52□□□□□ -0.41
UPK3BQ9BT76 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK3BQ9BT76 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 AC139713.2-201ENST00000641328 2723 ntBASIC12.51□□□□□ -0.41
UPK3BQ9BT76 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK3BQ9BT76 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms