Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.89■□□□□ 0.3
CPPED1Q9BRF8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.89■□□□□ 0.3
CPPED1Q9BRF8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPPED1Q9BRF8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.89■□□□□ 0.3
CPPED1Q9BRF8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 AC009947.2-201ENST00000444014 672 ntBASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 MIR4785-201ENST00000585005 73 ntBASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 AC008687.5-201ENST00000593746 558 ntBASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CPPED1Q9BRF8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 AL121761.2-201ENST00000598007 1648 ntBASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 TSPY14P-201ENST00000303979 915 ntBASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 REXO1L11P-201ENST00000620964 1927 ntBASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.88■□□□□ 0.29
CPPED1Q9BRF8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 MIR3917-201ENST00000580971 93 ntBASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPPED1Q9BRF8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms