Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.59■□□□□ 0.57
CDCA3Q99618 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.59■□□□□ 0.57
CDCA3Q99618 AC096734.2-201ENST00000562054 433 ntBASIC18.59■□□□□ 0.57
CDCA3Q99618 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.59■□□□□ 0.57
CDCA3Q99618 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CDCA3Q99618 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.59■□□□□ 0.57
CDCA3Q99618 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.59■□□□□ 0.57
CDCA3Q99618 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 AL049757.1-201ENST00000616842 1596 ntBASIC18.59■□□□□ 0.57
CDCA3Q99618 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDCA3Q99618 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.58■□□□□ 0.57
CDCA3Q99618 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDCA3Q99618 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.58■□□□□ 0.57
CDCA3Q99618 AC132938.5-201ENST00000624980 1813 ntBASIC18.58■□□□□ 0.57
CDCA3Q99618 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CDCA3Q99618 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CDCA3Q99618 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDCA3Q99618 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CDCA3Q99618 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.58■□□□□ 0.57
CDCA3Q99618 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.58■□□□□ 0.56
CDCA3Q99618 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDCA3Q99618 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.58■□□□□ 0.56
CDCA3Q99618 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.58■□□□□ 0.56
CDCA3Q99618 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 AP000344.2-201ENST00000512987 629 ntBASIC18.58■□□□□ 0.56
CDCA3Q99618 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.58■□□□□ 0.56
CDCA3Q99618 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
CDCA3Q99618 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.58■□□□□ 0.56
CDCA3Q99618 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.58■□□□□ 0.56
CDCA3Q99618 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
CDCA3Q99618 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDCA3Q99618 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CDCA3Q99618 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.57■□□□□ 0.56
CDCA3Q99618 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.57■□□□□ 0.56
CDCA3Q99618 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CDCA3Q99618 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.57■□□□□ 0.56
CDCA3Q99618 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CDCA3Q99618 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.57■□□□□ 0.56
CDCA3Q99618 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.57■□□□□ 0.56
CDCA3Q99618 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.57■□□□□ 0.56
CDCA3Q99618 GGTLC5P-201ENST00000617623 998 ntBASIC18.57■□□□□ 0.56
CDCA3Q99618 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.57■□□□□ 0.56
CDCA3Q99618 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDCA3Q99618 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CDCA3Q99618 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDCA3Q99618 AC093010.1-201ENST00000473625 1624 ntBASIC18.56■□□□□ 0.56
CDCA3Q99618 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CDCA3Q99618 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDCA3Q99618 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.56■□□□□ 0.56
CDCA3Q99618 ESPNP-201ENST00000270691 2015 ntBASIC18.56■□□□□ 0.56
CDCA3Q99618 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CDCA3Q99618 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CDCA3Q99618 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.56■□□□□ 0.56
CDCA3Q99618 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDCA3Q99618 IGLL3P-201ENST00000412472 434 ntBASIC18.56■□□□□ 0.56
CDCA3Q99618 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CDCA3Q99618 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.56■□□□□ 0.56
CDCA3Q99618 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.56■□□□□ 0.56
CDCA3Q99618 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms