Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 NPAP1P7-201ENST00000613027 823 ntBASIC18.59■□□□□ 0.57
HAPLN3Q96S86 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HAPLN3Q96S86 KRT18P55-202ENST00000578578 1546 ntBASIC18.59■□□□□ 0.57
HAPLN3Q96S86 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 KRT18P1-202ENST00000452408 1331 ntBASIC18.58■□□□□ 0.57
HAPLN3Q96S86 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.58■□□□□ 0.57
HAPLN3Q96S86 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HAPLN3Q96S86 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 AC246785.2-201ENST00000432512 513 ntBASIC18.57■□□□□ 0.56
HAPLN3Q96S86 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 AC011840.4-201ENST00000578471 627 ntBASIC18.57■□□□□ 0.56
HAPLN3Q96S86 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 AP002414.4-201ENST00000589764 1148 ntBASIC18.57■□□□□ 0.56
HAPLN3Q96S86 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 AC139713.2-201ENST00000641328 2723 ntBASIC18.57■□□□□ 0.56
HAPLN3Q96S86 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
HAPLN3Q96S86 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HAPLN3Q96S86 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms