Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 AL136038.4-201ENST00000603606 1261 ntBASIC17.06■□□□□ 0.32
BBS4Q96RK4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 AC005332.8-201ENST00000622750 2735 ntBASIC17.06■□□□□ 0.32
BBS4Q96RK4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BBS4Q96RK4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BBS4Q96RK4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 AL391807.1-203ENST00000604392 2365 ntBASIC17.05■□□□□ 0.32
BBS4Q96RK4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 STARP1-201ENST00000397973 869 ntBASIC17.05■□□□□ 0.32
BBS4Q96RK4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 FAM8A6P-201ENST00000407496 1135 ntBASIC17.05■□□□□ 0.32
BBS4Q96RK4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.05■□□□□ 0.32
BBS4Q96RK4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BBS4Q96RK4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 RNF152P1-201ENST00000397754 604 ntBASIC17.04■□□□□ 0.32
BBS4Q96RK4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 AK4P3-201ENST00000418260 669 ntBASIC17.04■□□□□ 0.32
BBS4Q96RK4 TSPY5P-201ENST00000426936 936 ntBASIC17.04■□□□□ 0.32
BBS4Q96RK4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BBS4Q96RK4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BBS4Q96RK4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 AC022898.2-201ENST00000616822 1312 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 SPDYE15P-201ENST00000424157 909 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BBS4Q96RK4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.03■□□□□ 0.32
BBS4Q96RK4 AC092647.4-201ENST00000457211 535 ntBASIC17.03■□□□□ 0.32
BBS4Q96RK4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms