Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 AC105020.6-201ENST00000621523 1217 ntBASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PKNOX2Q96KN3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 PCDHA14-201ENST00000506751 2298 ntBASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.46■□□□□ 0.71
PKNOX2Q96KN3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 KRT19P1-201ENST00000405746 1186 ntBASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 TERF1P5-201ENST00000477545 1207 ntBASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 AC026691.1-201ENST00000602502 2017 ntBASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PKNOX2Q96KN3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKNOX2Q96KN3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PKNOX2Q96KN3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.44■□□□□ 0.7
PKNOX2Q96KN3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PKNOX2Q96KN3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PKNOX2Q96KN3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PKNOX2Q96KN3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms