Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 AC073592.3-201ENST00000625118 1834 ntBASIC19.43■□□□□ 0.7
PGBD4Q96DM1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 AC132938.6-201ENST00000623828 1655 ntBASIC19.43■□□□□ 0.7
PGBD4Q96DM1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PGBD4Q96DM1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 AP005117.1-201ENST00000584346 1413 ntBASIC19.42■□□□□ 0.7
PGBD4Q96DM1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 RNPS1P1-201ENST00000507437 918 ntBASIC19.42■□□□□ 0.7
PGBD4Q96DM1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 HCG11-201ENST00000411553 5696 ntBASIC19.42■□□□□ 0.7
PGBD4Q96DM1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PGBD4Q96DM1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 RPS2P28-201ENST00000314255 741 ntBASIC19.41■□□□□ 0.7
PGBD4Q96DM1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 FAM220CP-201ENST00000395253 831 ntBASIC19.41■□□□□ 0.7
PGBD4Q96DM1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 RNA5SP419-201ENST00000515908 135 ntBASIC19.41■□□□□ 0.7
PGBD4Q96DM1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 AC022898.2-201ENST00000616822 1312 ntBASIC19.41■□□□□ 0.7
PGBD4Q96DM1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PGBD4Q96DM1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PGBD4Q96DM1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms