Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CTHRC1Q96CG8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 NPAP1P7-201ENST00000613027 823 ntBASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTHRC1Q96CG8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 TPSP2-201ENST00000561760 610 ntBASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 AC011840.4-201ENST00000578471 627 ntBASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 AC005336.2-201ENST00000593183 939 ntBASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 AC069148.1-201ENST00000608741 768 ntBASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 AC125634.1-201ENST00000438758 1403 ntBASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTHRC1Q96CG8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AC020763.4-201ENST00000623414 4170 ntBASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 ATP5G2P1-201ENST00000433580 426 ntBASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.61■□□□□ 0.25
CTHRC1Q96CG8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms