Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 FITM1-202ENST00000559294 800 ntBASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SLC44A1Q8WWI5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC44A1Q8WWI5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC44A1Q8WWI5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC44A1Q8WWI5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC44A1Q8WWI5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SLC44A1Q8WWI5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
SLC44A1Q8WWI5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 Z99916.2-201ENST00000604037 246 ntBASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 AC010653.2-201ENST00000623505 997 ntBASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 NKILA-202ENST00000614771 2598 ntBASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.01■□□□□ 0.47
SLC44A1Q8WWI5 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 AC124067.4-201ENST00000519691 2379 ntBASIC18■□□□□ 0.47
SLC44A1Q8WWI5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 AC008687.5-201ENST00000593746 558 ntBASIC18■□□□□ 0.47
SLC44A1Q8WWI5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
SLC44A1Q8WWI5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC44A1Q8WWI5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms