Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 BNIP3P18-201ENST00000593976 575 ntBASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01555Q8NAE3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01555Q8NAE3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01555Q8NAE3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 AC099336.1-202ENST00000602961 463 ntBASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 AC009949.1-201ENST00000623048 1830 ntBASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.25■□□□□ 0.35
LINC01555Q8NAE3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 DUSP5P1-201ENST00000441325 1139 ntBASIC17.24■□□□□ 0.35
LINC01555Q8NAE3 NUS1P1-201ENST00000446295 882 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms