Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 DRAXINP1-201ENST00000437611 948 ntBASIC18.42■□□□□ 0.54
RTL3Q8N8U3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RTL3Q8N8U3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 TPSP2-201ENST00000561760 610 ntBASIC18.41■□□□□ 0.54
RTL3Q8N8U3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 MIR3180-1-201ENST00000580374 94 ntBASIC18.41■□□□□ 0.54
RTL3Q8N8U3 MIR3180-3-201ENST00000584616 94 ntBASIC18.41■□□□□ 0.54
RTL3Q8N8U3 AC093458.2-201ENST00000623150 629 ntBASIC18.41■□□□□ 0.54
RTL3Q8N8U3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RTL3Q8N8U3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 AC246785.2-201ENST00000432512 513 ntBASIC18.4■□□□□ 0.54
RTL3Q8N8U3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 AC011840.4-201ENST00000578471 627 ntBASIC18.4■□□□□ 0.54
RTL3Q8N8U3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 AC008764.6-201ENST00000595909 2069 ntBASIC18.4■□□□□ 0.54
RTL3Q8N8U3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RTL3Q8N8U3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.39■□□□□ 0.53
RTL3Q8N8U3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.39■□□□□ 0.53
RTL3Q8N8U3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms