Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 AC091076.1-201ENST00000610741 619 ntBASIC18.46■□□□□ 0.55
PAF1Q8N7H5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PAF1Q8N7H5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
PAF1Q8N7H5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.46■□□□□ 0.54
PAF1Q8N7H5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PAF1Q8N7H5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 SDHAP2-201ENST00000455183 2001 ntBASIC18.45■□□□□ 0.54
PAF1Q8N7H5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PAF1Q8N7H5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AL136038.3-201ENST00000561909 1096 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 HYMAI.1-201ENST00000620949 238 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AC093458.2-201ENST00000623150 629 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AP000550.4-202ENST00000639755 178 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AC104581.1-202ENST00000635932 2618 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 AC005332.1-201ENST00000577698 1310 ntBASIC18.44■□□□□ 0.54
PAF1Q8N7H5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.44■□□□□ 0.54
PAF1Q8N7H5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PAF1Q8N7H5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms