Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.91■□□□□ 0.46
EFCAB3Q8N7B9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EFCAB3Q8N7B9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
EFCAB3Q8N7B9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 AC093677.2-201ENST00000600169 1863 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 HEIH-201ENST00000623091 1652 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 AC012317.2-201ENST00000623305 2251 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 KRT126P-201ENST00000549467 1181 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 AC108673.2-201ENST00000608909 565 ntBASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFCAB3Q8N7B9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
EFCAB3Q8N7B9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
EFCAB3Q8N7B9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFCAB3Q8N7B9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 AC138028.4-201ENST00000564984 1845 ntBASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 AC124067.4-201ENST00000519691 2379 ntBASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFCAB3Q8N7B9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms