Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 PKD1P1-201ENST00000458669 6805 ntBASIC18.24■□□□□ 0.51
PGBD3Q8N328 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PGBD3Q8N328 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PGBD3Q8N328 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 RNA5SP419-201ENST00000515908 135 ntBASIC18.23■□□□□ 0.51
PGBD3Q8N328 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 AC009533.2-201ENST00000543664 586 ntBASIC18.23■□□□□ 0.51
PGBD3Q8N328 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 AC005336.2-201ENST00000593183 939 ntBASIC18.23■□□□□ 0.51
PGBD3Q8N328 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PGBD3Q8N328 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PGBD3Q8N328 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.22■□□□□ 0.51
PGBD3Q8N328 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 SCARNA2-201ENST00000458748 420 ntBASIC18.22■□□□□ 0.51
PGBD3Q8N328 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 KRT18P58-201ENST00000527480 1120 ntBASIC18.22■□□□□ 0.51
PGBD3Q8N328 AC092865.5-201ENST00000545435 363 ntBASIC18.22■□□□□ 0.51
PGBD3Q8N328 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 LINC00602-201ENST00000629776 2065 ntBASIC18.22■□□□□ 0.51
PGBD3Q8N328 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PGBD3Q8N328 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 SDHAP2-201ENST00000455183 2001 ntBASIC18.22■□□□□ 0.51
PGBD3Q8N328 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.22■□□□□ 0.51
PGBD3Q8N328 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 RPS2P28-201ENST00000314255 741 ntBASIC18.21■□□□□ 0.51
PGBD3Q8N328 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 MTCL1P1-201ENST00000446207 792 ntBASIC18.21■□□□□ 0.51
PGBD3Q8N328 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 AL355877.3-201ENST00000622820 899 ntBASIC18.21■□□□□ 0.51
PGBD3Q8N328 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.21■□□□□ 0.51
PGBD3Q8N328 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PGBD3Q8N328 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PGBD3Q8N328 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PGBD3Q8N328 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
PGBD3Q8N328 NEFHP1-201ENST00000412845 2629 ntBASIC18.2■□□□□ 0.5
PGBD3Q8N328 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms