Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 AL359736.2-201ENST00000621992 437 ntBASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LINC01561Q8N1V8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 LINC00602-201ENST00000629776 2065 ntBASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 DDX43P3-201ENST00000441064 443 ntBASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 BX088651.1-201ENST00000540551 451 ntBASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AC010240.3-201ENST00000607688 395 ntBASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AC092666.2-201ENST00000613287 246 ntBASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
LINC01561Q8N1V8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms