Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC00528Q8N1L1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC112907.2-201ENST00000448639 330 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC090680.1-201ENST00000464696 860 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 PRSS44-201ENST00000515154 1146 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 MTND1P6-201ENST00000523621 946 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 CLEC4GP1-201ENST00000596555 870 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AL691432.3-201ENST00000621860 400 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC116407.4-201ENST00000623319 1061 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC022919.1-201ENST00000624979 626 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 AC068620.4-201ENST00000636730 1182 ntBASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LINC00528Q8N1L1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
LINC00528Q8N1L1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
LINC00528Q8N1L1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms