Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SMC5Q8IY18 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SMC5Q8IY18 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 AC211429.1-201ENST00000415277 523 ntBASIC22.21■■□□□ 1.15
SMC5Q8IY18 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 AC116407.2-201ENST00000613639 860 ntBASIC22.21■■□□□ 1.15
SMC5Q8IY18 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
SMC5Q8IY18 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SMC5Q8IY18 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
SMC5Q8IY18 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.2■■□□□ 1.15
SMC5Q8IY18 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 RNF152P1-201ENST00000397754 604 ntBASIC22.2■■□□□ 1.14
SMC5Q8IY18 KRT18P57-201ENST00000443599 1254 ntBASIC22.2■■□□□ 1.14
SMC5Q8IY18 SPDYE13P-201ENST00000445314 798 ntBASIC22.2■■□□□ 1.14
SMC5Q8IY18 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 AC112698.1-201ENST00000510299 916 ntBASIC22.2■■□□□ 1.14
SMC5Q8IY18 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 LINC01451-201ENST00000623792 534 ntBASIC22.2■■□□□ 1.14
SMC5Q8IY18 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 FZD10-202ENST00000539839 3282 ntBASIC22.2■■□□□ 1.14
SMC5Q8IY18 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SMC5Q8IY18 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC22.2■■□□□ 1.14
SMC5Q8IY18 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 FAM8A6P-201ENST00000407496 1135 ntBASIC22.19■■□□□ 1.14
SMC5Q8IY18 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SMC5Q8IY18 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SMC5Q8IY18 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMC5Q8IY18 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMC5Q8IY18 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMC5Q8IY18 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SMC5Q8IY18 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SMC5Q8IY18 AL353692.3-201ENST00000407031 1396 ntBASIC22.18■■□□□ 1.14
SMC5Q8IY18 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 TSPY12P-201ENST00000421279 868 ntBASIC22.18■■□□□ 1.14
SMC5Q8IY18 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 HOMER2P1-201ENST00000455653 964 ntBASIC22.18■■□□□ 1.14
SMC5Q8IY18 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.18■■□□□ 1.14
SMC5Q8IY18 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms