Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM42Q8IWZ5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRIM42Q8IWZ5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 RPS2P4-201ENST00000476944 856 ntBASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AC124016.1-201ENST00000609552 612 ntBASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AC130371.2-201ENST00000619443 611 ntBASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 AC133963.1-201ENST00000504166 1679 ntBASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 KRT16P1-201ENST00000399124 1418 ntBASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM42Q8IWZ5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 AC093827.2-201ENST00000512654 315 ntBASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM42Q8IWZ5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 AL355312.1-201ENST00000407115 2176 ntBASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 AC133681.1-201ENST00000465482 601 ntBASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TRIM42Q8IWZ5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms