Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 AC022898.2-201ENST00000616822 1312 ntBASIC17.56■□□□□ 0.4
VRK3Q8IV63 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 TSSC2-201ENST00000450217 709 ntBASIC17.56■□□□□ 0.4
VRK3Q8IV63 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 IGHV3-41-201ENST00000613121 348 ntBASIC17.56■□□□□ 0.4
VRK3Q8IV63 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.56■□□□□ 0.4
VRK3Q8IV63 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.56■□□□□ 0.4
VRK3Q8IV63 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VRK3Q8IV63 AC005332.8-201ENST00000622750 2735 ntBASIC17.56■□□□□ 0.4
VRK3Q8IV63 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 AC134043.2-201ENST00000624206 2238 ntBASIC17.55■□□□□ 0.4
VRK3Q8IV63 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 CHCHD2P8-201ENST00000429873 447 ntBASIC17.55■□□□□ 0.4
VRK3Q8IV63 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 GUSBP12-201ENST00000513727 720 ntBASIC17.55■□□□□ 0.4
VRK3Q8IV63 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
VRK3Q8IV63 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VRK3Q8IV63 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 SLC25A6P5-201ENST00000435663 894 ntBASIC17.54■□□□□ 0.4
VRK3Q8IV63 AC091607.1-201ENST00000490318 1060 ntBASIC17.54■□□□□ 0.4
VRK3Q8IV63 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 AC090616.6-201ENST00000582640 721 ntBASIC17.54■□□□□ 0.4
VRK3Q8IV63 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
VRK3Q8IV63 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VRK3Q8IV63 AC009949.1-201ENST00000623048 1830 ntBASIC17.54■□□□□ 0.4
VRK3Q8IV63 AC006116.8-202ENST00000587620 1550 ntBASIC17.53■□□□□ 0.4
VRK3Q8IV63 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VRK3Q8IV63 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.53■□□□□ 0.4
VRK3Q8IV63 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms