Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.86■□□□□ 0.29
CCDC71Q8IV32 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 MIR4674-201ENST00000582457 87 ntBASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AC116407.4-201ENST00000623319 1061 ntBASIC16.86■□□□□ 0.29
CCDC71Q8IV32 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AL096828.2-201ENST00000567259 1965 ntBASIC16.86■□□□□ 0.29
CCDC71Q8IV32 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 TNRC18P3-201ENST00000441896 2691 ntBASIC16.85■□□□□ 0.29
CCDC71Q8IV32 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.85■□□□□ 0.29
CCDC71Q8IV32 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 AC022211.2-201ENST00000585075 2527 ntBASIC16.85■□□□□ 0.29
CCDC71Q8IV32 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 HCG4P8-203ENST00000443049 980 ntBASIC16.85■□□□□ 0.29
CCDC71Q8IV32 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 MYLKP1-201ENST00000509077 1580 ntBASIC16.85■□□□□ 0.29
CCDC71Q8IV32 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC71Q8IV32 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 NEK4P2-201ENST00000580004 1012 ntBASIC16.84■□□□□ 0.29
CCDC71Q8IV32 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CCDC71Q8IV32 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms