Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 KRT8P47-201ENST00000604727 1398 ntBASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHD1LQ86WJ1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 AC141586.5-201ENST00000624546 2050 ntBASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 KRT18P57-201ENST00000443599 1254 ntBASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 KRT18P38-201ENST00000449496 1282 ntBASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 AC006011.2-201ENST00000621313 1158 ntBASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.19■■□□□ 1.14
CHD1LQ86WJ1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 KRT18P48-201ENST00000434763 852 ntBASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 AC108860.2-201ENST00000562760 2183 ntBASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHD1LQ86WJ1 AC133963.1-201ENST00000504166 1679 ntBASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 TSPY5P-201ENST00000426936 936 ntBASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 LINC00304-203ENST00000565008 1864 ntBASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 AC020916.1-201ENST00000587762 1774 ntBASIC22.17■■□□□ 1.14
CHD1LQ86WJ1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHD1LQ86WJ1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms