Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SYVN1Q86TM6 AC012317.2-201ENST00000623305 2251 ntBASIC17.69■□□□□ 0.42
SYVN1Q86TM6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYVN1Q86TM6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYVN1Q86TM6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYVN1Q86TM6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SYVN1Q86TM6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SYVN1Q86TM6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SYVN1Q86TM6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYVN1Q86TM6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYVN1Q86TM6 AC020916.1-201ENST00000587762 1774 ntBASIC17.66■□□□□ 0.42
SYVN1Q86TM6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SYVN1Q86TM6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SYVN1Q86TM6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.66■□□□□ 0.42
SYVN1Q86TM6 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.66■□□□□ 0.42
SYVN1Q86TM6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms