Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 KRT18P65-201ENST00000439811 1286 ntBASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 AL390955.2-201ENST00000603032 514 ntBASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
VPS13BQ7Z7G8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 IGLL3P-201ENST00000412472 434 ntBASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 KRT19P2-202ENST00000557173 1012 ntBASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 SNHG9-202ENST00000564014 471 ntBASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 AL513210.1-201ENST00000629608 234 ntBASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VPS13BQ7Z7G8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 CD82-202ENST00000342935 967 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AL049757.1-201ENST00000616842 1596 ntBASIC11□□□□□ -0.65
VPS13BQ7Z7G8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11□□□□□ -0.65
VPS13BQ7Z7G8 AC004706.3-202ENST00000621574 984 ntBASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms