Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 RN7SL606P-201ENST00000472779 293 ntBASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 FAM86EP-206ENST00000510506 987 ntBASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
COLCA1Q6ZS62 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 PCDHB18P-201ENST00000524813 2368 ntBASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
COLCA1Q6ZS62 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 TSPY22P-201ENST00000427496 604 ntBASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 LINC00896-202ENST00000609602 2128 ntBASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 AL353801.3-201ENST00000609898 542 ntBASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 AC009949.1-201ENST00000623048 1830 ntBASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
COLCA1Q6ZS62 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AC005332.1-201ENST00000577698 1310 ntBASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 KRT8P26-201ENST00000534154 1276 ntBASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COLCA1Q6ZS62 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COLCA1Q6ZS62 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms