Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CCDC141Q6ZP82 AC211486.1-202ENST00000416371 468 ntBASIC26.63■■□□□ 1.85
CCDC141Q6ZP82 AC211476.1-201ENST00000503899 468 ntBASIC26.63■■□□□ 1.85
CCDC141Q6ZP82 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC26.63■■□□□ 1.85
CCDC141Q6ZP82 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC141Q6ZP82 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AC018845.2-201ENST00000568326 409 ntBASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AC079781.4-201ENST00000641908 219 ntBASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 AC092865.6-201ENST00000642101 219 ntBASIC26.62■■□□□ 1.85
CCDC141Q6ZP82 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 AL096828.2-201ENST00000567259 1965 ntBASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CCDC141Q6ZP82 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 STK25P1-201ENST00000585406 838 ntBASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 TMED1-207ENST00000591695 809 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 AC010654.1-201ENST00000615722 808 ntBASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 AL513190.1-201ENST00000621254 727 ntBASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC26.6■■□□□ 1.85
CCDC141Q6ZP82 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 AC018445.3-201ENST00000624177 1945 ntBASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 AC010507.1-201ENST00000633895 436 ntBASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CCDC141Q6ZP82 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 CRYGEP-201ENST00000412192 528 ntBASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 AC100803.2-201ENST00000562459 1963 ntBASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.58■■□□□ 1.85
CCDC141Q6ZP82 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 METTL26-205ENST00000397666 726 ntTSL 2 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 METTL21AP1-201ENST00000438852 635 ntBASIC26.57■■□□□ 1.84
CCDC141Q6ZP82 DDX43P3-201ENST00000441064 443 ntBASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms