Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 AC104417.2-201ENST00000562989 1793 ntBASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 AL445675.2-201ENST00000620291 557 ntBASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 AC006011.2-201ENST00000621313 1158 ntBASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 AC092850.2-201ENST00000623821 2697 ntBASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
FOXR1Q6PIV2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 AK4P3-201ENST00000418260 669 ntBASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 EGLN1P1-201ENST00000531623 762 ntBASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXR1Q6PIV2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 MST1L-201ENST00000442552 2185 ntBASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC018553.1-201ENST00000616682 1458 ntBASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC026271.3-201ENST00000571884 352 ntBASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
FOXR1Q6PIV2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms