Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 AL596442.2-201ENST00000610240 980 ntBASIC26.99■■□□□ 1.91
CDC42BPAQ5VT25 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 CYMP-203ENST00000474680 1263 ntBASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CDC42BPAQ5VT25 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 COX5BP2-201ENST00000392354 334 ntBASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 MRPL20P1-201ENST00000400819 433 ntBASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 AC005829.1-201ENST00000570002 483 ntBASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 C20orf181-201ENST00000623918 480 ntBASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CDC42BPAQ5VT25 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 MIR4469-201ENST00000583919 79 ntBASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 AC018445.3-201ENST00000624177 1945 ntBASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 NKTR-203ENST00000442970 646 ntTSL 2 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CDC42BPAQ5VT25 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CDC42BPAQ5VT25 AL096828.2-201ENST00000567259 1965 ntBASIC26.95■■□□□ 1.91
CDC42BPAQ5VT25 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 MAL2-202ENST00000531508 892 ntTSL 3 BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 AC109462.3-201ENST00000573934 613 ntBASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CDC42BPAQ5VT25 AC009336.1-201ENST00000608941 1553 ntBASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CDC42BPAQ5VT25 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 DDX43P3-201ENST00000441064 443 ntBASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 RPL28-205ENST00000558131 444 ntTSL 5 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
CDC42BPAQ5VT25 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms