Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC069335.1-201ENST00000489972 472 ntBASIC15.48■□□□□ 0.07
LRRK2Q5S007 AC023141.13-201ENST00000604991 943 ntBASIC15.48■□□□□ 0.07
LRRK2Q5S007 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.48■□□□□ 0.07
LRRK2Q5S007 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRRK2Q5S007 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 AC116407.2-201ENST00000613639 860 ntBASIC15.47■□□□□ 0.07
LRRK2Q5S007 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 GPR53P-205ENST00000457298 1084 ntBASIC15.47■□□□□ 0.07
LRRK2Q5S007 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRRK2Q5S007 FEM1AP3-201ENST00000403722 1741 ntBASIC15.47■□□□□ 0.07
LRRK2Q5S007 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.47■□□□□ 0.07
LRRK2Q5S007 AC005082.1-201ENST00000413042 2259 ntBASIC15.47■□□□□ 0.07
LRRK2Q5S007 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 IGHV3-72-202ENST00000621503 303 ntBASIC15.46■□□□□ 0.07
LRRK2Q5S007 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
LRRK2Q5S007 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRK2Q5S007 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRRK2Q5S007 RPS2P32-201ENST00000439199 892 ntBASIC15.46■□□□□ 0.06
LRRK2Q5S007 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.46■□□□□ 0.06
LRRK2Q5S007 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.46■□□□□ 0.06
LRRK2Q5S007 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.46■□□□□ 0.06
LRRK2Q5S007 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.46■□□□□ 0.06
LRRK2Q5S007 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.46■□□□□ 0.06
LRRK2Q5S007 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.46■□□□□ 0.06
LRRK2Q5S007 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRRK2Q5S007 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 AC003669.1-201ENST00000334569 611 ntBASIC15.45■□□□□ 0.06
LRRK2Q5S007 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 PIN1P1-201ENST00000412108 996 ntBASIC15.45■□□□□ 0.06
LRRK2Q5S007 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 AC010460.3-201ENST00000511359 1579 ntBASIC15.45■□□□□ 0.06
LRRK2Q5S007 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRK2Q5S007 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRK2Q5S007 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms