Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.91■□□□□ 0.62
PTPN20Q4JDL3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 GNAS-203ENST00000306120 1878 ntBASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 MIR1224-201ENST00000408193 85 ntBASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 MTCL1P1-201ENST00000446207 792 ntBASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.9■□□□□ 0.62
PTPN20Q4JDL3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PTPN20Q4JDL3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 PCED1CP-201ENST00000419887 785 ntBASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PTPN20Q4JDL3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AC009949.1-201ENST00000623048 1830 ntBASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 RN7SL606P-201ENST00000472779 293 ntBASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 KRT8P26-201ENST00000534154 1276 ntBASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PTPN20Q4JDL3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms