Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
USH1GQ495M9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.59■□□□□ 0.89
USH1GQ495M9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.59■□□□□ 0.89
USH1GQ495M9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USH1GQ495M9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
USH1GQ495M9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USH1GQ495M9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USH1GQ495M9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USH1GQ495M9 INTS4P1-201ENST00000438455 1935 ntBASIC20.59■□□□□ 0.89
USH1GQ495M9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USH1GQ495M9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
USH1GQ495M9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
USH1GQ495M9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.58■□□□□ 0.89
USH1GQ495M9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USH1GQ495M9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.58■□□□□ 0.89
USH1GQ495M9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.58■□□□□ 0.89
USH1GQ495M9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.58■□□□□ 0.89
USH1GQ495M9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.58■□□□□ 0.89
USH1GQ495M9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USH1GQ495M9 AC011467.2-201ENST00000598425 242 ntBASIC20.58■□□□□ 0.89
USH1GQ495M9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.58■□□□□ 0.88
USH1GQ495M9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USH1GQ495M9 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USH1GQ495M9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USH1GQ495M9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USH1GQ495M9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USH1GQ495M9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.58■□□□□ 0.88
USH1GQ495M9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USH1GQ495M9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
USH1GQ495M9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
USH1GQ495M9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.57■□□□□ 0.88
USH1GQ495M9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.57■□□□□ 0.88
USH1GQ495M9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.57■□□□□ 0.88
USH1GQ495M9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.57■□□□□ 0.88
USH1GQ495M9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.57■□□□□ 0.88
USH1GQ495M9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.57■□□□□ 0.88
USH1GQ495M9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.57■□□□□ 0.88
USH1GQ495M9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 TP73-AS1-207ENST00000624167 988 ntBASIC20.57■□□□□ 0.88
USH1GQ495M9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.57■□□□□ 0.88
USH1GQ495M9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.57■□□□□ 0.88
USH1GQ495M9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USH1GQ495M9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.56■□□□□ 0.88
USH1GQ495M9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
USH1GQ495M9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.56■□□□□ 0.88
USH1GQ495M9 MRPL3P1-201ENST00000400109 1033 ntBASIC20.56■□□□□ 0.88
USH1GQ495M9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.56■□□□□ 0.88
USH1GQ495M9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.56■□□□□ 0.88
USH1GQ495M9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.56■□□□□ 0.88
USH1GQ495M9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.56■□□□□ 0.88
USH1GQ495M9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.56■□□□□ 0.88
USH1GQ495M9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.56■□□□□ 0.88
USH1GQ495M9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.56■□□□□ 0.88
USH1GQ495M9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USH1GQ495M9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
USH1GQ495M9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.56■□□□□ 0.88
USH1GQ495M9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USH1GQ495M9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms