Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PDS5AQ29RF7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 SPDYE21P-201ENST00000413323 827 ntBASIC21.46■■□□□ 1.03
PDS5AQ29RF7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 AC139887.3-201ENST00000568585 713 ntBASIC21.46■■□□□ 1.03
PDS5AQ29RF7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 NKAPP1-205ENST00000585790 367 ntBASIC21.46■■□□□ 1.03
PDS5AQ29RF7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 AL049840.3-201ENST00000602669 611 ntBASIC21.46■■□□□ 1.03
PDS5AQ29RF7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PDS5AQ29RF7 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.46■■□□□ 1.03
PDS5AQ29RF7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PDS5AQ29RF7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
PDS5AQ29RF7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 AL049757.1-201ENST00000616842 1596 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 AC004408.2-201ENST00000623613 2777 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 RPS2P28-201ENST00000314255 741 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 PRYP5-201ENST00000451909 266 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 AC093909.1-201ENST00000504731 1122 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 AC019129.2-201ENST00000609837 1235 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 FLJ13224-201ENST00000313737 1514 ntBASIC21.45■■□□□ 1.02
PDS5AQ29RF7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PDS5AQ29RF7 AC100803.2-201ENST00000562459 1963 ntBASIC21.44■■□□□ 1.02
PDS5AQ29RF7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PDS5AQ29RF7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 KRT18P55-202ENST00000578578 1546 ntBASIC21.43■■□□□ 1.02
PDS5AQ29RF7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 MTDHP4-201ENST00000600287 670 ntBASIC21.43■■□□□ 1.02
PDS5AQ29RF7 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 AC107918.4-202ENST00000641623 219 ntBASIC21.43■■□□□ 1.02
PDS5AQ29RF7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PDS5AQ29RF7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms