Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP1P78357 AL031432.2-201ENST00000566714 459 ntBASIC21.28■■□□□ 1
CNTNAP1P78357 AL928711.1-201ENST00000570165 459 ntBASIC21.28■■□□□ 1
CNTNAP1P78357 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.28■■□□□ 1
CNTNAP1P78357 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CNTNAP1P78357 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
CNTNAP1P78357 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CNTNAP1P78357 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.27■■□□□ 1
CNTNAP1P78357 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP1P78357 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CNTNAP1P78357 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP1P78357 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.27■■□□□ 1
CNTNAP1P78357 AC004449.1-201ENST00000564240 433 ntBASIC21.27■■□□□ 1
CNTNAP1P78357 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.27■■□□□ 1
CNTNAP1P78357 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CNTNAP1P78357 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.27■■□□□ 1
CNTNAP1P78357 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP1P78357 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP1P78357 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CNTNAP1P78357 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 AC006557.2-201ENST00000592985 1240 ntBASIC21.26■□□□□ 0.99
CNTNAP1P78357 AJ011932.1-201ENST00000621707 465 ntBASIC21.26■□□□□ 0.99
CNTNAP1P78357 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 GPR89P-201ENST00000407924 1495 ntBASIC21.26■□□□□ 0.99
CNTNAP1P78357 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.26■□□□□ 0.99
CNTNAP1P78357 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CNTNAP1P78357 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.25■□□□□ 0.99
CNTNAP1P78357 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.25■□□□□ 0.99
CNTNAP1P78357 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CNTNAP1P78357 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 GAPDHP21-201ENST00000450301 1010 ntBASIC21.24■□□□□ 0.99
CNTNAP1P78357 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AC018845.2-201ENST00000568326 409 ntBASIC21.24■□□□□ 0.99
CNTNAP1P78357 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AC010460.3-201ENST00000511359 1579 ntBASIC21.24■□□□□ 0.99
CNTNAP1P78357 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.24■□□□□ 0.99
CNTNAP1P78357 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 AC079776.2-201ENST00000641154 1609 ntBASIC21.24■□□□□ 0.99
CNTNAP1P78357 GMCL1P1-201ENST00000463439 1581 ntBASIC21.24■□□□□ 0.99
CNTNAP1P78357 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CNTNAP1P78357 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP1P78357 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CNTNAP1P78357 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.23■□□□□ 0.99
CNTNAP1P78357 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.23■□□□□ 0.99
CNTNAP1P78357 BX005266.1-201ENST00000473402 457 ntBASIC21.23■□□□□ 0.99
CNTNAP1P78357 AC136632.2-201ENST00000512891 861 ntBASIC21.23■□□□□ 0.99
CNTNAP1P78357 AC087641.1-201ENST00000557561 1021 ntBASIC21.23■□□□□ 0.99
CNTNAP1P78357 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.23■□□□□ 0.99
CNTNAP1P78357 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.23■□□□□ 0.99
CNTNAP1P78357 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CNTNAP1P78357 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms