Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.4■□□□□ 0.22
CXCR4P61073 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CXCR4P61073 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
CXCR4P61073 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CXCR4P61073 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
CXCR4P61073 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CXCR4P61073 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 FAM207BP-201ENST00000447172 505 ntBASIC16.39■□□□□ 0.21
CXCR4P61073 AC008040.2-201ENST00000461049 708 ntBASIC16.39■□□□□ 0.21
CXCR4P61073 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR4P61073 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.39■□□□□ 0.21
CXCR4P61073 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR4P61073 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR4P61073 AC026271.3-201ENST00000571884 352 ntBASIC16.39■□□□□ 0.21
CXCR4P61073 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 AC073648.6-201ENST00000641589 218 ntBASIC16.39■□□□□ 0.21
CXCR4P61073 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CXCR4P61073 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CXCR4P61073 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 UBALD1-205ENST00000590891 2641 ntBASIC16.39■□□□□ 0.21
CXCR4P61073 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.39■□□□□ 0.21
CXCR4P61073 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR4P61073 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR4P61073 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.39■□□□□ 0.21
CXCR4P61073 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CXCR4P61073 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 AL162727.3-201ENST00000635661 2787 ntBASIC16.38■□□□□ 0.21
CXCR4P61073 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CXCR4P61073 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.38■□□□□ 0.21
CXCR4P61073 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.38■□□□□ 0.21
CXCR4P61073 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CXCR4P61073 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCR4P61073 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CXCR4P61073 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCR4P61073 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.37■□□□□ 0.21
CXCR4P61073 PCDHA14-201ENST00000506751 2298 ntBASIC16.37■□□□□ 0.21
CXCR4P61073 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
CXCR4P61073 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 ID1-201ENST00000376105 1233 ntBASIC16.37■□□□□ 0.21
CXCR4P61073 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CXCR4P61073 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms