Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.46■□□□□ 0.23
CDC42P60953 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC42P60953 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 AL353807.1-201ENST00000427475 662 ntBASIC16.46■□□□□ 0.23
CDC42P60953 AC008040.2-201ENST00000461049 708 ntBASIC16.46■□□□□ 0.23
CDC42P60953 AC133681.1-201ENST00000465482 601 ntBASIC16.46■□□□□ 0.23
CDC42P60953 AC233263.1-201ENST00000578059 224 ntBASIC16.46■□□□□ 0.23
CDC42P60953 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.46■□□□□ 0.23
CDC42P60953 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC42P60953 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.46■□□□□ 0.23
CDC42P60953 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CDC42P60953 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDC42P60953 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDC42P60953 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.46■□□□□ 0.23
CDC42P60953 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDC42P60953 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CDC42P60953 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CDC42P60953 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC42P60953 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDC42P60953 NFIC-211ENST00000641145 8399 ntBASIC16.46■□□□□ 0.22
CDC42P60953 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CDC42P60953 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CDC42P60953 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.45■□□□□ 0.22
CDC42P60953 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 AC124016.1-201ENST00000609552 612 ntBASIC16.45■□□□□ 0.22
CDC42P60953 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CDC42P60953 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDC42P60953 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.45■□□□□ 0.22
CDC42P60953 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CDC42P60953 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CDC42P60953 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CDC42P60953 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 AC026366.1-201ENST00000488803 879 ntBASIC16.44■□□□□ 0.22
CDC42P60953 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 MIR3180-5-201ENST00000583743 153 ntBASIC16.44■□□□□ 0.22
CDC42P60953 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.44■□□□□ 0.22
CDC42P60953 CR392000.1-201ENST00000624770 1228 ntBASIC16.44■□□□□ 0.22
CDC42P60953 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.44■□□□□ 0.22
CDC42P60953 CROCCP2-202ENST00000412962 2773 ntBASIC16.44■□□□□ 0.22
CDC42P60953 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.44■□□□□ 0.22
CDC42P60953 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDC42P60953 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.44■□□□□ 0.22
CDC42P60953 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.43■□□□□ 0.22
CDC42P60953 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDC42P60953 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms