Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA4P54764 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EPHA4P54764 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 AC096633.1-201ENST00000422446 749 ntBASIC17.26■□□□□ 0.35
EPHA4P54764 KRT18P67-201ENST00000432816 1264 ntBASIC17.26■□□□□ 0.35
EPHA4P54764 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 ABCD1P5-201ENST00000445663 754 ntBASIC17.26■□□□□ 0.35
EPHA4P54764 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 FAM197Y8-203ENST00000450145 560 ntBASIC17.26■□□□□ 0.35
EPHA4P54764 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.26■□□□□ 0.35
EPHA4P54764 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.26■□□□□ 0.35
EPHA4P54764 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
EPHA4P54764 AL773604.1-201ENST00000617417 272 ntBASIC17.26■□□□□ 0.35
EPHA4P54764 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
EPHA4P54764 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
EPHA4P54764 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EPHA4P54764 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
EPHA4P54764 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.25■□□□□ 0.35
EPHA4P54764 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
EPHA4P54764 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
EPHA4P54764 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.25■□□□□ 0.35
EPHA4P54764 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.25■□□□□ 0.35
EPHA4P54764 FGFR3P6-201ENST00000457012 610 ntBASIC17.25■□□□□ 0.35
EPHA4P54764 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.25■□□□□ 0.35
EPHA4P54764 AP001269.4-201ENST00000609611 512 ntBASIC17.25■□□□□ 0.35
EPHA4P54764 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.25■□□□□ 0.35
EPHA4P54764 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 AC093503.3-201ENST00000624917 2352 ntBASIC17.25■□□□□ 0.35
EPHA4P54764 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
EPHA4P54764 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.25■□□□□ 0.35
EPHA4P54764 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
EPHA4P54764 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
EPHA4P54764 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EPHA4P54764 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EPHA4P54764 AC120498.9-201ENST00000339021 3867 ntBASIC17.24■□□□□ 0.35
EPHA4P54764 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
EPHA4P54764 HLA-A-201ENST00000376802 1334 ntBASIC17.24■□□□□ 0.35
EPHA4P54764 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHA4P54764 AP005117.1-201ENST00000584346 1413 ntBASIC17.24■□□□□ 0.35
EPHA4P54764 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA4P54764 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
EPHA4P54764 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.24■□□□□ 0.35
EPHA4P54764 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHA4P54764 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHA4P54764 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA4P54764 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA4P54764 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA4P54764 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms