Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TSPY12P-201ENST00000421279 868 ntBASIC19.21■□□□□ 0.67
RAD23BP54727 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAD23BP54727 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.21■□□□□ 0.67
RAD23BP54727 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.21■□□□□ 0.67
RAD23BP54727 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RAD23BP54727 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RAD23BP54727 AC009154.2-201ENST00000621177 724 ntBASIC19.21■□□□□ 0.67
RAD23BP54727 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.21■□□□□ 0.67
RAD23BP54727 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.21■□□□□ 0.67
RAD23BP54727 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RAD23BP54727 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RAD23BP54727 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.21■□□□□ 0.67
RAD23BP54727 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
RAD23BP54727 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAD23BP54727 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD23BP54727 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD23BP54727 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD23BP54727 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD23BP54727 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD23BP54727 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD23BP54727 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
RAD23BP54727 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD23BP54727 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.2■□□□□ 0.66
RAD23BP54727 AC091076.1-201ENST00000610741 619 ntBASIC19.2■□□□□ 0.66
RAD23BP54727 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RAD23BP54727 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD23BP54727 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RAD23BP54727 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.2■□□□□ 0.66
RAD23BP54727 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RAD23BP54727 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RAD23BP54727 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RAD23BP54727 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD23BP54727 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
RAD23BP54727 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RAD23BP54727 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD23BP54727 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD23BP54727 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.19■□□□□ 0.66
RAD23BP54727 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RAD23BP54727 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.19■□□□□ 0.66
RAD23BP54727 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
RAD23BP54727 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAD23BP54727 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.18■□□□□ 0.66
RAD23BP54727 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 BX276092.5-203ENST00000456199 560 ntBASIC19.18■□□□□ 0.66
RAD23BP54727 RN7SL606P-201ENST00000472779 293 ntBASIC19.18■□□□□ 0.66
RAD23BP54727 AC068472.1-201ENST00000474589 881 ntBASIC19.18■□□□□ 0.66
RAD23BP54727 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.18■□□□□ 0.66
RAD23BP54727 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAD23BP54727 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms