Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.15■□□□□ 0.82
LBX1P52954 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LBX1P52954 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.14■□□□□ 0.81
LBX1P52954 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LBX1P52954 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LBX1P52954 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
LBX1P52954 AC092580.3-201ENST00000430932 139 ntBASIC20.14■□□□□ 0.81
LBX1P52954 AC103564.2-201ENST00000432853 1299 ntBASIC20.14■□□□□ 0.81
LBX1P52954 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.14■□□□□ 0.81
LBX1P52954 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.14■□□□□ 0.81
LBX1P52954 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.14■□□□□ 0.81
LBX1P52954 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.14■□□□□ 0.81
LBX1P52954 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LBX1P52954 AC099522.2-201ENST00000607001 744 ntBASIC20.14■□□□□ 0.81
LBX1P52954 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LBX1P52954 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LBX1P52954 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.14■□□□□ 0.81
LBX1P52954 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LBX1P52954 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LBX1P52954 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
LBX1P52954 HAUS4P1-201ENST00000406739 1145 ntBASIC20.13■□□□□ 0.81
LBX1P52954 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
LBX1P52954 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LBX1P52954 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.13■□□□□ 0.81
LBX1P52954 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.13■□□□□ 0.81
LBX1P52954 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.13■□□□□ 0.81
LBX1P52954 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.13■□□□□ 0.81
LBX1P52954 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.13■□□□□ 0.81
LBX1P52954 AC026150.2-201ENST00000564693 1156 ntBASIC20.13■□□□□ 0.81
LBX1P52954 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LBX1P52954 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LBX1P52954 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.13■□□□□ 0.81
LBX1P52954 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.13■□□□□ 0.81
LBX1P52954 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.13■□□□□ 0.81
LBX1P52954 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LBX1P52954 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
LBX1P52954 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.13■□□□□ 0.81
LBX1P52954 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.13■□□□□ 0.81
LBX1P52954 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LBX1P52954 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.12■□□□□ 0.81
LBX1P52954 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
LBX1P52954 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LBX1P52954 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.12■□□□□ 0.81
LBX1P52954 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LBX1P52954 AC079776.1-201ENST00000401540 1152 ntBASIC20.12■□□□□ 0.81
LBX1P52954 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.12■□□□□ 0.81
LBX1P52954 SPDYE7P-202ENST00000420373 878 ntBASIC20.12■□□□□ 0.81
LBX1P52954 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.12■□□□□ 0.81
LBX1P52954 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 AC241585.1-201ENST00000433527 519 ntBASIC20.12■□□□□ 0.81
LBX1P52954 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.12■□□□□ 0.81
LBX1P52954 AL513480.1-201ENST00000451731 511 ntBASIC20.12■□□□□ 0.81
LBX1P52954 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.12■□□□□ 0.81
LBX1P52954 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.12■□□□□ 0.81
LBX1P52954 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LBX1P52954 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.12■□□□□ 0.81
LBX1P52954 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
LBX1P52954 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LBX1P52954 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LBX1P52954 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LBX1P52954 AC138969.3-201ENST00000546612 1459 ntBASIC20.11■□□□□ 0.81
LBX1P52954 AC138932.2-201ENST00000548268 1459 ntBASIC20.11■□□□□ 0.81
LBX1P52954 AC126755.4-201ENST00000549796 1459 ntBASIC20.11■□□□□ 0.81
LBX1P52954 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.11■□□□□ 0.81
LBX1P52954 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LBX1P52954 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 AC243562.1-201ENST00000560672 389 ntBASIC20.11■□□□□ 0.81
LBX1P52954 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.11■□□□□ 0.81
LBX1P52954 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.11■□□□□ 0.81
LBX1P52954 SPTSSB-204ENST00000617024 1292 ntBASIC20.11■□□□□ 0.81
LBX1P52954 AL162274.1-201ENST00000617191 1098 ntBASIC20.11■□□□□ 0.81
LBX1P52954 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.11■□□□□ 0.81
LBX1P52954 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.11■□□□□ 0.81
LBX1P52954 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LBX1P52954 MTMR9LP-203ENST00000426597 1545 ntBASIC20.11■□□□□ 0.81
LBX1P52954 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LBX1P52954 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LBX1P52954 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms