Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.91■□□□□ 0.3
CLK1P49759 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLK1P49759 AL023284.2-201ENST00000405850 579 ntBASIC16.91■□□□□ 0.3
CLK1P49759 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CLK1P49759 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.91■□□□□ 0.3
CLK1P49759 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.91■□□□□ 0.3
CLK1P49759 MCCD1P1-208ENST00000445732 328 ntBASIC16.91■□□□□ 0.3
CLK1P49759 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.91■□□□□ 0.3
CLK1P49759 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.91■□□□□ 0.3
CLK1P49759 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.91■□□□□ 0.3
CLK1P49759 AL512604.3-201ENST00000569583 964 ntBASIC16.91■□□□□ 0.3
CLK1P49759 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.91■□□□□ 0.3
CLK1P49759 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.91■□□□□ 0.3
CLK1P49759 AC141586.5-201ENST00000624546 2050 ntBASIC16.91■□□□□ 0.3
CLK1P49759 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLK1P49759 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLK1P49759 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLK1P49759 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CLK1P49759 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.9■□□□□ 0.3
CLK1P49759 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.9■□□□□ 0.3
CLK1P49759 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.9■□□□□ 0.3
CLK1P49759 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.9■□□□□ 0.3
CLK1P49759 AC007663.1-201ENST00000438948 1240 ntBASIC16.9■□□□□ 0.3
CLK1P49759 AC010947.1-201ENST00000623454 693 ntBASIC16.9■□□□□ 0.3
CLK1P49759 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CLK1P49759 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLK1P49759 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLK1P49759 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CLK1P49759 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLK1P49759 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
CLK1P49759 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
CLK1P49759 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CLK1P49759 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLK1P49759 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
CLK1P49759 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLK1P49759 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.89■□□□□ 0.29
CLK1P49759 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 CYP2D8P-201ENST00000433633 1490 ntBASIC16.89■□□□□ 0.29
CLK1P49759 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.89■□□□□ 0.29
CLK1P49759 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 SLC25A6P5-201ENST00000435663 894 ntBASIC16.89■□□□□ 0.29
CLK1P49759 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.89■□□□□ 0.29
CLK1P49759 AP003041.3-201ENST00000527151 707 ntBASIC16.89■□□□□ 0.29
CLK1P49759 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.89■□□□□ 0.29
CLK1P49759 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.89■□□□□ 0.29
CLK1P49759 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.89■□□□□ 0.29
CLK1P49759 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CLK1P49759 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLK1P49759 AC073912.3-201ENST00000624414 853 ntBASIC16.89■□□□□ 0.29
CLK1P49759 MYC-208ENST00000641036 567 ntBASIC16.89■□□□□ 0.29
CLK1P49759 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.89■□□□□ 0.29
CLK1P49759 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
CLK1P49759 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLK1P49759 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLK1P49759 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLK1P49759 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CLK1P49759 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLK1P49759 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLK1P49759 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.88■□□□□ 0.29
CLK1P49759 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms