Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CENPFP49454 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.15■□□□□ 0.82
CENPFP49454 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CENPFP49454 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.15■□□□□ 0.82
CENPFP49454 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.15■□□□□ 0.82
CENPFP49454 AL513210.1-201ENST00000629608 234 ntBASIC20.15■□□□□ 0.82
CENPFP49454 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.15■□□□□ 0.82
CENPFP49454 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CENPFP49454 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.15■□□□□ 0.82
CENPFP49454 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.14■□□□□ 0.82
CENPFP49454 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CENPFP49454 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CENPFP49454 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.14■□□□□ 0.82
CENPFP49454 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CENPFP49454 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.14■□□□□ 0.82
CENPFP49454 LINC00628-201ENST00000628516 1289 ntBASIC20.14■□□□□ 0.82
CENPFP49454 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CENPFP49454 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CENPFP49454 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CENPFP49454 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.14■□□□□ 0.81
CENPFP49454 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.14■□□□□ 0.81
CENPFP49454 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.14■□□□□ 0.81
CENPFP49454 SIGLEC30P-201ENST00000455569 941 ntBASIC20.14■□□□□ 0.81
CENPFP49454 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CENPFP49454 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.14■□□□□ 0.81
CENPFP49454 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.14■□□□□ 0.81
CENPFP49454 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.14■□□□□ 0.81
CENPFP49454 AC010654.1-201ENST00000615722 808 ntBASIC20.14■□□□□ 0.81
CENPFP49454 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.14■□□□□ 0.81
CENPFP49454 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.14■□□□□ 0.81
CENPFP49454 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.14■□□□□ 0.81
CENPFP49454 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.13■□□□□ 0.81
CENPFP49454 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CENPFP49454 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.13■□□□□ 0.81
CENPFP49454 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.13■□□□□ 0.81
CENPFP49454 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CENPFP49454 AC004877.2-201ENST00000623941 599 ntBASIC20.13■□□□□ 0.81
CENPFP49454 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CENPFP49454 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.13■□□□□ 0.81
CENPFP49454 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CENPFP49454 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CENPFP49454 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.13■□□□□ 0.81
CENPFP49454 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CENPFP49454 AC069262.1-201ENST00000539058 672 ntBASIC20.13■□□□□ 0.81
CENPFP49454 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CENPFP49454 AL008721.1-201ENST00000609964 604 ntBASIC20.13■□□□□ 0.81
CENPFP49454 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.13■□□□□ 0.81
CENPFP49454 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CENPFP49454 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.13■□□□□ 0.81
CENPFP49454 CLDN5-201ENST00000403084 2357 ntBASIC20.12■□□□□ 0.81
CENPFP49454 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.12■□□□□ 0.81
CENPFP49454 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 AC092902.6-201ENST00000641783 218 ntBASIC20.12■□□□□ 0.81
CENPFP49454 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.12■□□□□ 0.81
CENPFP49454 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.12■□□□□ 0.81
CENPFP49454 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.12■□□□□ 0.81
CENPFP49454 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.12■□□□□ 0.81
CENPFP49454 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CENPFP49454 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
CENPFP49454 AC004461.1-201ENST00000412461 403 ntBASIC20.12■□□□□ 0.81
CENPFP49454 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 AC004706.3-202ENST00000621574 984 ntBASIC20.12■□□□□ 0.81
CENPFP49454 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 AL161938.1-201ENST00000569833 2180 ntBASIC20.12■□□□□ 0.81
CENPFP49454 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CENPFP49454 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CENPFP49454 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.12■□□□□ 0.81
CENPFP49454 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.12■□□□□ 0.81
CENPFP49454 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.11■□□□□ 0.81
CENPFP49454 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.11■□□□□ 0.81
CENPFP49454 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CENPFP49454 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CENPFP49454 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms