Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC1A1P43005 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.83■□□□□ 0.6
SLC1A1P43005 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC1A1P43005 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC1A1P43005 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A1P43005 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SLC1A1P43005 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SLC1A1P43005 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A1P43005 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SLC1A1P43005 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SLC1A1P43005 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.83■□□□□ 0.6
SLC1A1P43005 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SLC1A1P43005 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A1P43005 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLC1A1P43005 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC1A1P43005 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A1P43005 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC1A1P43005 KRT18P65-201ENST00000439811 1286 ntBASIC18.82■□□□□ 0.6
SLC1A1P43005 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A1P43005 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.82■□□□□ 0.6
SLC1A1P43005 AL031432.5-201ENST00000641059 760 ntBASIC18.82■□□□□ 0.6
SLC1A1P43005 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A1P43005 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC1A1P43005 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC1A1P43005 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC1A1P43005 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC1A1P43005 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SLC1A1P43005 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC1A1P43005 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 AL138688.1-201ENST00000624851 1594 ntBASIC18.81■□□□□ 0.6
SLC1A1P43005 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC1A1P43005 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.81■□□□□ 0.6
SLC1A1P43005 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC1A1P43005 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC1A1P43005 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC1A1P43005 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.81■□□□□ 0.6
SLC1A1P43005 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SLC1A1P43005 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SLC1A1P43005 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC1A1P43005 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SLC1A1P43005 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SLC1A1P43005 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 AC139713.2-201ENST00000641328 2723 ntBASIC18.8■□□□□ 0.6
SLC1A1P43005 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC1A1P43005 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC1A1P43005 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC1A1P43005 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 SLC25A3P1-201ENST00000443844 931 ntBASIC18.8■□□□□ 0.6
SLC1A1P43005 RASA4DP-201ENST00000460726 1199 ntBASIC18.8■□□□□ 0.6
SLC1A1P43005 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC1A1P43005 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SLC1A1P43005 AC140113.3-201ENST00000605663 199 ntBASIC18.8■□□□□ 0.6
SLC1A1P43005 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SLC1A1P43005 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC1A1P43005 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC1A1P43005 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC1A1P43005 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms