Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MTHFRP42898 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.76■□□□□ 0.59
MTHFRP42898 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.76■□□□□ 0.59
MTHFRP42898 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.76■□□□□ 0.59
MTHFRP42898 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
MTHFRP42898 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MTHFRP42898 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.76■□□□□ 0.59
MTHFRP42898 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MTHFRP42898 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.75■□□□□ 0.59
MTHFRP42898 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MTHFRP42898 AC009947.1-201ENST00000444350 727 ntBASIC18.75■□□□□ 0.59
MTHFRP42898 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 AC112698.1-201ENST00000510299 916 ntBASIC18.75■□□□□ 0.59
MTHFRP42898 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.75■□□□□ 0.59
MTHFRP42898 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.75■□□□□ 0.59
MTHFRP42898 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.75■□□□□ 0.59
MTHFRP42898 MIR1199-201ENST00000621445 119 ntBASIC18.75■□□□□ 0.59
MTHFRP42898 PGM5P2-202ENST00000637225 1043 ntBASIC18.75■□□□□ 0.59
MTHFRP42898 AP000867.4-201ENST00000641616 219 ntBASIC18.75■□□□□ 0.59
MTHFRP42898 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.75■□□□□ 0.59
MTHFRP42898 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MTHFRP42898 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.75■□□□□ 0.59
MTHFRP42898 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
MTHFRP42898 AC120498.9-201ENST00000339021 3867 ntBASIC18.75■□□□□ 0.59
MTHFRP42898 AC022898.2-201ENST00000616822 1312 ntBASIC18.74■□□□□ 0.59
MTHFRP42898 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
MTHFRP42898 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.74■□□□□ 0.59
MTHFRP42898 DNAJB3-202ENST00000449667 1266 ntBASIC18.74■□□□□ 0.59
MTHFRP42898 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.74■□□□□ 0.59
MTHFRP42898 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.74■□□□□ 0.59
MTHFRP42898 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.74■□□□□ 0.59
MTHFRP42898 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.74■□□□□ 0.59
MTHFRP42898 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.74■□□□□ 0.59
MTHFRP42898 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MTHFRP42898 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.74■□□□□ 0.59
MTHFRP42898 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTHFRP42898 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MTHFRP42898 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.73■□□□□ 0.59
MTHFRP42898 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTHFRP42898 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MTHFRP42898 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms